PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_38843.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 144aa MW: 16175.3 Da PI: 11.0835 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.3 | 2.9e-12 | 64 | 115 | 1 | 52 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 e++++r+rrk +NR++A+rsR+RK++++eeL+ v+ + ae ++L+ +l MLOC_38843.1 64 EERRRRQRRKVSNRLSAQRSRARKQQRLEELRGTVARFRAEKRELAAKLHAV 115 6889******************************************998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-8 | 60 | 115 | No hit | No description |
SMART | SM00338 | 1.5E-6 | 62 | 128 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-7 | 64 | 114 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.197 | 66 | 129 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.12E-8 | 68 | 116 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 71 | 86 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.61E-9 | 73 | 118 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MLSLQEAIGL DMDAMTSGFG FTPWEADTCP TLEELMAASS TTSSPSSSGG AAADQGHGLV 60 EDEEERRRRQ RRKVSNRLSA QRSRARKQQR LEELRGTVAR FRAEKRELAA KLHAVARHEL 120 AVRRQNARLR TEEAALKRRL GYLL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_38843.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020156626.1 | 5e-65 | ocs element-binding factor 1-like | ||||
TrEMBL | M0VZC7 | 3e-97 | M0VZC7_HORVV; Uncharacterized protein | ||||
STRING | MLOC_38843.1 | 6e-98 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13845 | 24 | 29 |