PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_37646.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | C2H2 | ||||||||
Protein Properties | Length: 181aa MW: 20322.1 Da PI: 8.357 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00034 | 11 | 24 | 1 | 14 |
EEETTTTEEESSHH CS zf-C2H2 1 ykCpdCgksFsrks 14 +kC++C+ksF++k+ MLOC_37646.2 11 FKCSKCNKSFTSKD 24 89*********987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF53335 | 1.19E-18 | 58 | 178 | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
Gene3D | G3DSA:3.40.50.150 | 9.5E-18 | 73 | 175 | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
CDD | cd02440 | 1.72E-6 | 93 | 175 | No hit | No description |
Pfam | PF13649 | 1.4E-12 | 94 | 177 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0080167 | Biological Process | response to karrikin | ||||
GO:0010287 | Cellular Component | plastoglobule | ||||
GO:0008168 | Molecular Function | methyltransferase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MNLPAIYRSG FKCSKCNKSF TSKDVFLDLT VTSGMKQYSE LKPARTELFR SPLVSFLYER 60 GWRQNFNRSG FPGRDEEFQM AQDYFQSVAG GILVDVSCGS GLFSRKFASS GAYSSVIALD 120 FSENMLRQCY DYIKQEETPM NTWNLALVRA DISRLPFASC SIDAIHAGAA IHCWPSPSNA 180 R |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_37646.2 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK360398 | 0.0 | AK360398.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1117E13. | |||
GenBank | AK362947 | 0.0 | AK362947.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2011I22. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020170885.1 | 1e-128 | uncharacterized methyltransferase At2g41040, chloroplastic-like isoform X2 | ||||
Swissprot | Q0WPT7 | 6e-95 | Y2104_ARATH; Uncharacterized methyltransferase At2g41040, chloroplastic | ||||
TrEMBL | M0VVI4 | 1e-128 | M0VVI4_HORVV; Uncharacterized protein | ||||
STRING | MLOC_37646.1 | 1e-129 | (Hordeum vulgare) |
Publications ? help Back to Top | |||
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