PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_34679.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 398aa MW: 42043.6 Da PI: 6.9912 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.8 | 1.1e-13 | 314 | 364 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r rr++kNRe+A rsR+RK+a++ eLe + L++eN +Lk e +++ + MLOC_34679.2 314 RRHRRMIKNRESAARSRARKQAYTVELEAELNHLKEENARLKAEEKTILLT 364 689***************************************987766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-11 | 309 | 375 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.852 | 312 | 357 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-10 | 314 | 360 | No hit | No description |
Pfam | PF00170 | 2.9E-11 | 314 | 362 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.9E-13 | 314 | 361 | No hit | No description |
CDD | cd14707 | 1.95E-25 | 314 | 368 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 317 | 332 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0010152 | Biological Process | pollen maturation | ||||
GO:0010187 | Biological Process | negative regulation of seed germination | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048316 | Biological Process | seed development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence Send to blast |
MASEMSKDVK FSDEEVTSHP RVGEGEEQTV GPARQSSIFA LTLDELQNSV CNPGRNFGSM 60 NMDEFMSNIW NAEEFLAATG GCLVGMEEVP VVGGGGSGGG GGDAGGSTLC RQGSFSLPPP 120 LCRKTVEEVW AEINREPRPV HAQPQAARPS PQPPVQPPAG NGGGAVAANG RQGTLGEMTL 180 EQFLVKAGVV RGSVAGGQAP MPGGMVHGQM NPMQQGQQPG PMMYQMAPAN GMFPVMGDGM 240 GFVPNGYAGM AVVPPPPPSQ GGVGIVSPGS SDGRSAMTQA DMVNCMADGA MMENGGARKR 300 GAPGDQSCER SIERRHRRMI KNRESAARSR ARKQAYTVEL EAELNHLKEE NARLKAEEKT 360 ILLTKKQMLV EKMMEQSKEN VNAKKGGALS RRCGSCSW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269|PubMed:17604002, ECO:0000269|PubMed:18236009, ECO:0000269|PubMed:21055780, ECO:0000269|PubMed:22071266}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00294 | DAP | Transfer from AT2G36270 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_34679.2 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269|PubMed:18236009, ECO:0000269|PubMed:21055780, ECO:0000269|PubMed:22071266}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK372580 | 0.0 | AK372580.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3005J06. | |||
GenBank | AK373766 | 0.0 | AK373766.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3043D06. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020182640.1 | 0.0 | protein ABSCISIC ACID-INSENSITIVE 5-like | ||||
Swissprot | Q8RZ35 | 1e-169 | ABI5_ORYSJ; bZIP transcription factor ABI5 homolog | ||||
TrEMBL | M0VNB3 | 0.0 | M0VNB3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_34679.1 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-35 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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