PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_17690.6
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 314aa    MW: 34694.4 Da    PI: 7.2858
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_17690.6genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-111846533
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLee 33
                  k +rr+++NReAAr+sR+RKka+i++Le 
  MLOC_17690.6 18 KTTRRLAQNREAARKSRLRKKAYIQQLES 46
                  789************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.4E-71477IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.0711660IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.31E-71759No hitNo description
PfamPF001701.1E-81854IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.3E-81962No hitNo description
PROSITE patternPS0003602136IPR004827Basic-leucine zipper domain
PfamPF141442.7E-3098172IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MATSSTHSDR TGKALDPKTT RRLAQNREAA RKSRLRKKAY IQQLESGKLK LAQLEQDLQR  60
ARSQGLLVGG APSGNSSPGA AMFDVEYNRW LDDDSRRMIE LRGGLHAHLP DGDLRAIIDD  120
TLTHYDELFR LKSAAARADV FHLITGMWAT PAERCFLWMG GFRPSDLLKT LAPQLDPLTE  180
QQMVGICSLE QSLQQAEEAL TQGLEQLHQS LAVTVAGSGS LSDDTNMGSF MGDMAVALGK  240
LANLEGFVIQ ADNLRQQTLH QMHRILTVRQ AARCFLAIGE YHNRLRALSS LWASRPREIL  300
MTDEGNCGEL SIAA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_17690.6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3702880.0AK370288.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2108D19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146200.10.0transcription factor TGAL4-like isoform X1
RefseqXP_020146201.10.0transcription factor TGAL4-like isoform X2
SwissprotQ53Q700.0TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A287NKT50.0A0A287NKT5_HORVV; Uncharacterized protein
STRINGTraes_4BS_B7A8F8CD8.10.0(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-139bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]