PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_17690.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 314aa MW: 34694.4 Da PI: 7.2858 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.3 | 1.2e-11 | 18 | 46 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k +rr+++NReAAr+sR+RKka+i++Le MLOC_17690.5 18 KTTRRLAQNREAARKSRLRKKAYIQQLES 46 789************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.4E-7 | 14 | 77 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.071 | 16 | 60 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.31E-7 | 17 | 59 | No hit | No description |
Pfam | PF00170 | 1.1E-8 | 18 | 54 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.3E-8 | 19 | 62 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 21 | 36 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.7E-30 | 98 | 172 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MATSSTHSDR TGKALDPKTT RRLAQNREAA RKSRLRKKAY IQQLESGKLK LAQLEQDLQR 60 ARSQGLLVGG APSGNSSPGA AMFDVEYNRW LDDDSRRMIE LRGGLHAHLP DGDLRAIIDD 120 TLTHYDELFR LKSAAARADV FHLITGMWAT PAERCFLWMG GFRPSDLLKT LAPQLDPLTE 180 QQMVGICSLE QSLQQAEEAL TQGLEQLHQS LAVTVAGSGS LSDDTNMGSF MGDMAVALGK 240 LANLEGFVIQ ADNLRQQTLH QMHRILTVRQ AARCFLAIGE YHNRLRALSS LWASRPREIL 300 MTDEGNCGEL SIAA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00131 | DAP | Transfer from AT1G08320 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_17690.5 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK370288 | 0.0 | AK370288.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2108D19. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020146200.1 | 0.0 | transcription factor TGAL4-like isoform X1 | ||||
Refseq | XP_020146201.1 | 0.0 | transcription factor TGAL4-like isoform X2 | ||||
Swissprot | Q53Q70 | 0.0 | TGAL4_ORYSJ; Transcription factor TGAL4 | ||||
TrEMBL | A0A287NKT5 | 0.0 | A0A287NKT5_HORVV; Uncharacterized protein | ||||
STRING | Traes_4BS_B7A8F8CD8.1 | 0.0 | (Triticum aestivum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-139 | bZIP family protein |
Publications ? help Back to Top | |||
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