PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_15184.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 291aa    MW: 32383.7 Da    PI: 9.2898
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_15184.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1392.8e-43151513128
           NAM   3 pGfrFhPtdeelvveyLkkkvegkk......leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyat..gkrknratksgyWkatgkdk 90 
                   pGfrFhPt+eel+ +yLk++v++++         +++i++v++y+++PwdLp  ++ a+e+ewyfF++rd ++ +  g r++r+t+ g+Wkatg+d+
  MLOC_15184.1  15 PGFRFHPTEEELLEFYLKHHVTSSSknqqlrAAPFNIIPTVHLYRHDPWDLPgLAAIASEREWYFFVPRDGRKLHagGGRPSRTTEGGFWKATGSDR 111
                   9*******************99888665554222358***************645556789********9776533399****************** PP

           NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   +v ++   ++lvglkktLv+y+grap+g+ktdWvm+eyrl
  MLOC_15184.1 112 AVRCAadPKRLVGLKKTLVYYQGRAPRGTKTDWVMNEYRL 151
                   ***98777788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-5011170IPR003441NAC domain
PROSITE profilePS5100552.09513170IPR003441NAC domain
PfamPF023651.9E-2415151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MDRRGAAAAP SLELPGFRFH PTEEELLEFY LKHHVTSSSK NQQLRAAPFN IIPTVHLYRH  60
DPWDLPGLAA IASEREWYFF VPRDGRKLHA GGGRPSRTTE GGFWKATGSD RAVRCAADPK  120
RLVGLKKTLV YYQGRAPRGT KTDWVMNEYR LPDLGAGEQQ DVVLCKVYRK AVSLKELEQR  180
VAMEELARAR STTASHSHSH SHSSAGSPDV SSSASELAHE AAVPVQHQHH GVKKEEAVAV  240
ARPPAMRLPQ LETARGGGGL EWMQDPFLTQ LRSPWMEGLC LSPYYASVLN F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-3931704168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_15184.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9676332e-90EU967633.1 Zea mays clone 304978 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175218.10.0NAC domain-containing protein 35-like
SwissprotQ10S653e-95NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A3B6TTD80.0A0A3B6TTD8_WHEAT; Uncharacterized protein
TrEMBLA0A453TB030.0A0A453TB03_AEGTS; Uncharacterized protein
STRINGMLOC_15184.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-73NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]