PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_14243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 160aa MW: 17618.9 Da PI: 9.6075 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 56 | 8.3e-18 | 88 | 144 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +++r+ r+++NRe+A rsR+RK+a++eeLe++v L N +Lkk+ +elk eva+l MLOC_14243.1 88 DDRRTVRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLKLKKQCKELKREVAAL 144 689**************************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.3E-15 | 86 | 150 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.024 | 88 | 144 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.7E-16 | 88 | 144 | No hit | No description |
Pfam | PF00170 | 2.4E-14 | 89 | 144 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.88E-19 | 90 | 144 | No hit | No description |
SuperFamily | SSF57959 | 6.75E-13 | 90 | 144 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MANYRLGGGG NGHYEMAAAA WREPESPQLS LMSGCSSLFS ISGLRDDDTD LHLLAGARSL 60 PSTPVSFGGF AGGDEVDMEL PQGGSGGDDR RTVRMMRNRE SALRSRARKR AYVEELEKEV 120 RRLVDDNLKL KKQCKELKRE VAALVLPTKS SLRRTSSTQF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_14243.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK249012 | 0.0 | AK249012.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf15j05, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020177215.1 | 1e-100 | protein FD-like | ||||
TrEMBL | M0UU57 | 1e-112 | M0UU57_HORVV; Uncharacterized protein | ||||
STRING | MLOC_14243.1 | 1e-113 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-12 | bZIP family protein |