PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_13431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 304aa MW: 34150.8 Da PI: 9.9624 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.6 | 1.5e-09 | 19 | 58 | 5 | 44 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKk ++++Le +L + ++ MLOC_13431.1 19 KTLRRLAQNREAARKSRLRKKSYVQQLESSKLKLAQLEQE 58 7889************************855444444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-6 | 15 | 78 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.335 | 17 | 61 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-6 | 19 | 60 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.44E-7 | 19 | 62 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-7 | 20 | 64 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 22 | 37 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.1E-33 | 101 | 176 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence Send to blast |
MASNSSDRSD RSDKPLDQKT LRRLAQNREA ARKSRLRKKS YVQQLESSKL KLAQLEQELQ 60 KARQQGIFIS SSGDQTHAMS GNGAMTFDLE YTRWLEDQNK QINELRTAVN AHASDSDLRL 120 IVDGIMSHYD EIFKVKGVAA KADVFHILSG MWKTPAERCF LWLGGFRPSE LLKLLVNHLE 180 PLTEQQMLGL TNLQQSSQQA EDALSQGMEA LQQSLAETLA GSLGSSSGSS GNVANYMGQM 240 AMAMGKLGTL ENFLRQADNL RQQTLHQMQR ILTIRQASRA LLAIHDYFSR LRALSSLWLA 300 RPRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Plays a negative role in rice basal defense responses to the bacterial blight pathogen Xanthomomas oryzae pv. oryzae (Xoo). May function in both positive and negative regulation of rice defense genes. Binds DNA in vitro (PubMed:16045470). Acts as transcriptional activator when bound to NPR1/NH1 in vitro (PubMed:22353606). Binds to the promoter sequence of CRK10 in vitro (PubMed:27176732). {ECO:0000269|PubMed:16045470, ECO:0000269|PubMed:22353606, ECO:0000269|PubMed:27176732}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_13431.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK363931 | 0.0 | AK363931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2020D02. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189386.1 | 0.0 | transcription factor TGA2.1 | ||||
Refseq | XP_020189387.1 | 0.0 | transcription factor TGA2.1 | ||||
Swissprot | Q7X993 | 0.0 | TGA21_ORYSJ; Transcription factor TGA2.1 | ||||
TrEMBL | A0A287H6P9 | 0.0 | A0A287H6P9_HORVV; Uncharacterized protein | ||||
TrEMBL | M0URE0 | 0.0 | M0URE0_HORVV; Uncharacterized protein | ||||
STRING | MLOC_13431.2 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-139 | bZIP family protein |
Publications ? help Back to Top | |||
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