PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_10725.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 127aa MW: 14116.2 Da PI: 10.3966 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36 | 1.6e-11 | 48 | 106 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +RK +i eLe+kv+ L++e ++L+ +l+ l+ +a++ +++ MLOC_10725.2 48 KRVKRVLANRQSAARSKERKMRYIVELEQKVQILQTEATTLAAQLNLLQRDSATVATQN 106 999*********************************************99998877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.5E-17 | 44 | 108 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.576 | 46 | 109 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-11 | 48 | 98 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-11 | 48 | 101 | No hit | No description |
Pfam | PF00170 | 1.6E-10 | 48 | 106 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 4.29E-18 | 49 | 100 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence Send to blast |
MGRLNFASPG GAAGMFSLEF GSAEFSPAEM KKIMADEKLA EMALADPKRV KRVLANRQSA 60 ARSKERKMRY IVELEQKVQI LQTEATTLAA QLNLLQRDSA TVATQNNELR FRLQAMEQQA 120 QLRDGAS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_10725.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT035229 | 1e-108 | BT035229.1 Zea mays full-length cDNA clone ZM_BFb0046N14 mRNA, complete cds. | |||
GenBank | JX469926 | 1e-108 | JX469926.1 Zea mays subsp. mays clone UT3184 bZIP-type transcription factor mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020177375.1 | 1e-71 | transcription factor RF2b-like | ||||
Swissprot | O22873 | 5e-40 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | A0A287PW43 | 3e-84 | A0A287PW43_HORVV; Uncharacterized protein | ||||
STRING | MLOC_10725.1 | 3e-83 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 3e-44 | bZIP family protein |
Publications ? help Back to Top | |||
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