PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_10418.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 493aa    MW: 54675.1 Da    PI: 7.9802
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_10418.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like742.1e-2394147155
       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                   kpr++Wt  LH++F+ea++++ G ++A Pk+i elm+v+ Lt+e ++SHLQkYRl
  MLOC_10418.1  94 KPRVEWTIALHNKFLEAINEI-GLNRAAPKKIWELMNVDYLTRESIASHLQKYRL 147
                   79*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011012.024137IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23001.5E-6553No hitNo description
Gene3DG3DSA:1.10.10.607.5E-2591152IPR009057Homeodomain-like
SuperFamilySSF466896.63E-1791151IPR009057Homeodomain-like
PROSITE profilePS512949.47491150IPR017930Myb domain
TIGRFAMsTIGR015576.9E-2294147IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MDYEKKAVMK GIEHGACDFM VKPVRTHKLK NIWQHVKRWR NPEATSHISD DDNDDQRVQQ  60
WTAAKSEGSR NRINGGDDSS KNKESTYIST TQKKPRVEWT IALHNKFLEA INEIGLNRAA  120
PKKIWELMNV DYLTRESIAS HLQKYRLYLK RVKSNSSGDT YGRRNSWHNM KNQSNFMHNP  180
EHERWSVASG DIASWSTDNY GAMGHFAQTK NIQGNFSMGS FLHGGRMSSY IGPQPPDVSR  240
FASSGDPSIR LYNNIPNEII LDEFPSCNSY ANLMRGKLME TCKGKTPSTL QSSFPKTTGG  300
GGRSLVPSQV DIPRINQLES FGMSSGQLHL QNEMAPFIIN TTSMGAFSDK MVAFNVASNP  360
SSTGMLNAHS SAPVAPYQMV NDGSITKLAT CYIEQMAPFD MESNTSSAGM MLNGSSAPCA  420
SRTSTKETHM VNGGRTTSTR PSHQTNSFVS LTQLLDGGDG AGILPMQEGT LDQEQFNDQL  480
NEINAFSMDD IFA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A8e-2390152163ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_10418.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166370.10.0two-component response regulator ORR24-like
RefseqXP_020201549.10.0two-component response regulator ORR24-like
TrEMBLM0UFB70.0M0UFB7_HORVV; Two-component response regulator
STRINGMLOC_10418.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-37response regulator 12