PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_10399.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 131aa    MW: 14476.2 Da    PI: 10.9665
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_10399.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.63.1e-1456112561
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                   ++  r++kNRe+A rsR+RK+a+++eLe++v  L + N +Lk + ++l+ e+a+l +
  MLOC_10399.1  56 QKSVRAMKNRESALRSRARKRAYTQELEKEVRRLVEDNLKLKRQCKQLQSEIAALNA 112
                   5778*************************************************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.9E-1051116IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-1451112No hitNo description
PROSITE profilePS5021710.97854113IPR004827Basic-leucine zipper domain
CDDcd147076.03E-1856110No hitNo description
SuperFamilySSF579596.06E-1157111No hitNo description
PfamPF001701.6E-1157112IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MSWEEPGSPQ LSLSGFSSLP SISSTAVRPA RLPSLSLSIG TGGEDQHLAV SSDDGQKSVR  60
AMKNRESALR SRARKRAYTQ ELEKEVRRLV EDNLKLKRQC KQLQSEIAAL NAQQPSNKQG  120
SPHRRTSSTQ F
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_10399.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3599580.0AK359958.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F24.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020174160.12e-81bZIP transcription factor 27-like
TrEMBLF2D7U64e-89F2D7U6_HORVV; Predicted protein
STRINGMLOC_10399.17e-90(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-11bZIP family protein