PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G044691.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family C2H2
Protein Properties Length: 444aa    MW: 47983.6 Da    PI: 9.5334
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G044691.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26e-05210232223
                           EETTTTEEESSHHHHHHHHHH.T CS
               zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                           +C++Cg+ F+r++  ++H  + H
  HL.SW.v1.0.G044691.1 210 TCHKCGEQFNRWEAAESHHLSkH 232
                           7*****************98877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280211232IPR007087Zinc finger, C2H2
SuperFamilySSF563992.45E-21234442No hitNo description
Gene3DG3DSA:3.90.228.101.1E-7242416IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MPTVWFSLKK SLHCKSEPSE VHDPKSRKHL STILTRKAGR SGCSRSIANL KDVIHGSKRH  60
MEKPPSCSPR SIGSSEFLNP ITHEVILSNS RCELKISGFN GFQEGVGNGN IGNGSGGSGG  120
NGGGSTFVGT LRPGTPGPGG HSTMHYFNPS FRTSSTPPRK SQFLVSDKEN STEGSGFGGS  180
AIFGGGNSNG VRPSNRISLD ADSNGSSTIT CHKCGEQFNR WEAAESHHLS KHAVTELVEG  240
DSSRKIVEII CRTSWLKSEN HCGRIERVLK VHNMQKTLAR FEEHREMVKM KASKLAKKHP  300
RCLADGNELL RFYGTTLACS LGLSGSSSLC VSEKCSVCRI IRNGFSAKKE LKEGVGVFTT  360
STSGRAFESI EIIEEDPTLR KALIVCRVIA GRVHKPLENI QEITGQVGFD SLAGKVGLYS  420
NIEELYLLNP RALLPCFVVI CKP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015897979.10.0uncharacterized protein LOC107431545
RefseqXP_015897987.10.0uncharacterized protein LOC107431545
TrEMBLA0A2P5C4K10.0A0A2P5C4K1_TREOI; Zinc finger, C2H2 domain containing protein
STRINGXP_010267823.10.0(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49831013
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-158C2H2 family protein