PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G044391.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | BES1 | ||||||||
Protein Properties | Length: 255aa MW: 26649.3 Da PI: 4.7336 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 35.3 | 4e-11 | 2 | 77 | 72 | 149 |
DUF822 72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149 g+kp+++++++g s+sasp+ss+q +sp++sy++sp++ssfpsp+s+ + + ++ +sl+p+l++l++ sss HL.SW.v1.0.G044391.1 2 GCKPMDRMDIMGGSTSASPCSSYQ--------PSPCASYNPSPATSSFPSPVSSHYTANVNSnnnadpNSLIPWLKTLTSGSSS 77 89**********************........888888888888888888877665444333356777********99887666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 9.9E-13 | 2 | 71 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
IGCKPMDRMD IMGGSTSASP CSSYQPSPCA SYNPSPATSS FPSPVSSHYT ANVNSNNNAD 60 PNSLIPWLKT LTSGSSSATS KFPHHLFIDS GSISAPVTPP LSSPTCRTPR NKNEWDDPMV 120 ASQNNPFQPS SNPQSPGRQV LPDSNWLAGI QSGPSSPTFS LVSRNPFGFK DEALSNGGSR 180 MWTPGQSGTC SPAIAAGLDN TSDIPMSDGN IAGAEFAFGS NTTGLVKPWK GERIEECVSD 240 DLELTLGNAT TSTW* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015875614.1 | 1e-119 | BES1/BZR1 homolog protein 4 isoform X3 | ||||
Swissprot | Q9ZV88 | 2e-88 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A2P5FDE3 | 1e-121 | A0A2P5FDE3_TREOI; BES1/BZR1 transcription factor | ||||
STRING | XP_009351745.1 | 1e-114 | (Pyrus x bretschneideri) | ||||
STRING | XP_008371512.1 | 1e-114 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2661 | 33 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 7e-82 | BES1/BZR1 homolog 4 |