PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G044336.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bHLH
Protein Properties Length: 499aa    MW: 53796.8 Da    PI: 7.7839
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G044336.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.37.4e-053864241255
                           HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                   HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           R +++ +++++L++l+ +      +K + a++L +A+ YIk Lq
  HL.SW.v1.0.G044336.1 386 RKEKLGDRIATLQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 424
                           7788899*********998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.871374423IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.22E-5384428No hitNo description
SuperFamilySSF474596.15E-11384436IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-8388431IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MESANLRHQH QLPDQLVGSP PLPLGIGAAP SCYGFGSSSN HHHAWSSSPT TSSIFNNNFG  60
NTNPNYDGMV SSKSTIITTR PVKSRVDHDN NINPVSHDNI ISLNSSNMVN AEFEFPWTNC  120
NSTTSTTITH ESAYDMNLAA KIEEESESIS FPKFAEILNS CTSTASTTTS ATTTSSTTTS  180
PSNSISNVND DYGHFFLKRR DLITTSGRNG TDENLLVKTL SSSTGQVVNV GNQISSATSD  240
QFDSNIMNGT FGGLMAVGCR GQFSHIYPSI NISNFNQSSP SSNISVTCSL DINSIGPHQS  300
LNDMNNLDVF REIPSNNFCG LLRLDQMHLP QRLSSGHSKG KPSFINSEIT VAKRGGGLIE  360
PKTTQSAPNK KPKMESRTSC PPFKVRKEKL GDRIATLQQL VSPFGKTDTA SVLMEAIGYI  420
KFLQNQVETL SVPYMKSSRN KITKTTQRGV KEDGSESELK GDLRSRGLCL VPLSCMSYVT  480
GDGGGGSMWP PANYGGRT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024030303.11e-107transcription factor bHLH110
TrEMBLA0A2P5F6H61e-158A0A2P5F6H6_TREOI; Myc-type, basic helix-loop-helix (BHLH) domain containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40453254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.11e-56bHLH family protein