PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G043787.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bHLH
Protein Properties Length: 273aa    MW: 30823.8 Da    PI: 6.9001
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G043787.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.2e-13100152155
                           CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                   HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                           ++ +hn+ Er RR+++N+ ++ Lr llP+ +   + kKls  +++ ++ +Y+ +Lq
  HL.SW.v1.0.G043787.1 100 KKLNHNASERDRRNKVNHMYSALRALLPNsD---HTKKLSIPATVSRVLKYVPDLQ 152
                           6789*************************44...6666**************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.07E-1298156No hitNo description
SuperFamilySSF474591.15E-1499169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.60599151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-11100170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-10100152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-9105157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MISFPTPPPP PPFISTNIVG WPLEDPIRHE DQNYFFRDIA TSSDPDQYSL LFLNNYFPAP  60
PPPSDQDHHH HRFEVDLSTT PSSSTTITIN TTTDLTMVKK KLNHNASERD RRNKVNHMYS  120
ALRALLPNSD HTKKLSIPAT VSRVLKYVPD LQEEIEGLVH MKKELLSRIK SRQQGNTTTD  180
QEINKIKSTA PNSLSSISAT QLSDKEVAVQ ISTYKLHNNL LSQMLHNLEN DGLSLLHASS  240
FESFGGRLFH NLHLQTSDEI GIERVILKLL EM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010108529.24e-89uncharacterized protein LOC21402320
TrEMBLA0A2P5ETM51e-101A0A2P5ETM5_TREOI; Basic helix-loop-helix transcription factor
STRINGXP_010108530.12e-85(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-45bHLH family protein