PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G042733.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bHLH
Protein Properties Length: 90aa    MW: 10082.5 Da    PI: 4.7381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G042733.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149e-0520571554
                          HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                   HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                          +i +   +L++llP +s  + + +  ++iL +++ YI  L
  HL.SW.v1.0.G042733.1 20 EIHDLVLKLQSLLPILS--RTPNVPASTILDETCTYIMRL 57
                          56677789*******73..55559999**********988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.9E-61973IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-72072IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MSNQNSSRSS SPFKPTTDDE IHDLVLKLQS LLPILSRTPN VPASTILDET CTYIMRLRRE  60
VDSLSGRLSQ LLDSAEIDDV ELIRRLLQQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010092048.13e-23transcription factor PRE4
TrEMBLA0A2P5F7A14e-26A0A2P5F7A1_TREOI; Basic helix-loop-helix transcription factor
STRINGXP_010092048.11e-22(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47710.15e-19BANQUO 3