PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G039209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | VOZ | ||||||||
Protein Properties | Length: 449aa MW: 50230.5 Da PI: 5.0929 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 416.3 | 5.2e-128 | 213 | 429 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataksp 89 pppsaf+gpkcalwdc+rpaqgs+w+qdycss+h++lalneglpg++pvlrp+gi++kd++lf al+ k+qgkevgipecegaa++k+p HL.SW.v1.0.G039209.1 213 PPPSAFMGPKCALWDCSRPAQGSKWCQDYCSSCHSVLALNEGLPGIAPVLRPGGIGMKDSPLFCALNLKIQGKEVGIPECEGAANTKCP 301 89*************************************************************************************** PP VOZ 90 wnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineld 178 wna+elfdl+llege +rewlffdkpr+afesgnrkqr lpdy+grgwhesrkqvmkefgglkrsyymdpqp++s+ewhl+eyein++ HL.SW.v1.0.G039209.1 302 WNAPELFDLCLLEGEKLREWLFFDKPRKAFESGNRKQRGLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPLTSHEWHLFEYEINNYT 390 ***************************************************************************************** PP VOZ 179 alalyrlelklvdekksakgkvskdsladlqkklgrlta 217 ++ lyrlelkl ++kks+kgkv kdsladl+kk+grlta HL.SW.v1.0.G039209.1 391 TCGLYRLELKLIEGKKSPKGKVLKDSLADLRKKMGRLTA 429 *************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence Send to blast |
MLSDSKSKCE SVSHQNLKEK TKHRVDDLQR IFSNLESARK DSRPGDIAVF EEQVHQMLRE 60 WKVELSEPTP ASSLLGGSLG SFSEELARLL QQYDVEDDAT SPLKELPLPK PEPEPDPEPN 120 LENFDAGNFS VFELDYFDNK ESQDLSFQGF PELKGSGVDF HETGPNDSNF VTGLEPHQFD 180 IYQDINQGLI VGANSTNQCA QDTLPNVLPN ISPPPSAFMG PKCALWDCSR PAQGSKWCQD 240 YCSSCHSVLA LNEGLPGIAP VLRPGGIGMK DSPLFCALNL KIQGKEVGIP ECEGAANTKC 300 PWNAPELFDL CLLEGEKLRE WLFFDKPRKA FESGNRKQRG LPDYNGRGWH ESRKQVMKEF 360 GGLKRSYYMD PQPLTSHEWH LFEYEINNYT TCGLYRLELK LIEGKKSPKG KVLKDSLADL 420 RKKMGRLTAE APVDDGNSSR TRADTVRK* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010093981.2 | 0.0 | transcription factor VOZ1 isoform X2 | ||||
Refseq | XP_024019795.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Swissprot | Q9SGQ0 | 1e-171 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2P5E7P1 | 0.0 | A0A2P5E7P1_TREOI; Cytochrome c-like domain containing protein | ||||
STRING | XP_010093981.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1498 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-161 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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