PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G038933.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bHLH
Protein Properties Length: 377aa    MW: 42024.3 Da    PI: 5.3759
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G038933.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.4e-13157208155
                           CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                   HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  HL.SW.v1.0.G038933.1 157 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 208
                           79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.60E-14155212No hitNo description
Gene3DG3DSA:4.10.280.106.1E-14156212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.326156207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-17156227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-10157208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-10162213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MALEAVVFPQ NPYFSYSANR ELYAMIGVGG NWVSYADDDE SNNNNSINIY DHQDQADAAP  60
SAASFDFLGN QTESSTCPYG DWNPSPSSSM VPHFNELHLS NSNPSPDAAN GNNNTATTTD  120
DFQPFDALTA FPQTTMTARP KRRRSRSRKN KEDIENQRMT HIAVERNRRK QMNEYLSVLR  180
SLMPDSYVQR GDQASIIGGA INFVKELEQQ VQFLGAQKES HDHQNSEDDH HHHQSGGQDD  240
SMPFSEFFTF PQYSTSSITH CENSAAAMAG ESPSSSVSRE RRSAIADIEV TMVESHASLK  300
IRSKKRSKQL LKMVSGLHTM RLTVLHLNVT TQDQIILYSV SVKVEDDCKL SSVDEIATAV  360
YQILARIQEE TLIMAN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157168RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106856.11e-141transcription factor bHLH94
TrEMBLA0A2P5C6B41e-175A0A2P5C6B4_TREOI; Basic helix-loop-helix transcription factor
STRINGXP_010106856.11e-140(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.17e-75bHLH family protein