PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G027431.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bHLH
Protein Properties Length: 538aa    MW: 57452.1 Da    PI: 5.9849
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G027431.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.10.000364975291855
                           HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                   HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +++  L++++ +      +K + a++L +A++YIk Lq
  HL.SW.v1.0.G027431.1 497 ERITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 529
                           5677788888877.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.099479528IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-7494533IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-8494534IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.53E-4497533No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MAEECAESSV ATSSSAVVVP PTNWWDLHPS TAAAAVGSSA LSSWCLHNNN NTNTTTSSGN  60
IPWHNIQAAA AAPNSNSDED VSISTSFTNA SNHSGLTVES SRRLIEPAAS SSDDLMADQQ  120
AASDNHIWSQ VLLNVGNNGD LHNHQDVGEN FLDMLSSSKS NNITSSGMYE PPACDYLKKL  180
DTSSSKYSNT WDNHNHFSSN NFDDQKPMIN INGSSNTTAF NESMIENERL TNKLSNLIST  240
WSIAPPELEM NINTSTATNN NRHYFSPDQT CNISLSSSME DNHLKQTFGD SGAGLFPPCN  300
YLLPSLKLEN GHGGRGGGEI EEAPCPGAEA AGALLRRPYI GAMGGYQVGL NNSSFMAAAD  360
LHNGKYGHYG MPAPPLVDSY SSCSSNVTAT TAKNFADVIS FGGRLGKPLM DLHASNNNKT  420
CINKSLGSSD SSKKQGLQTS TPTKGSGRGQ GNTSSEGKKK RSDNNQDTSE TSLKKSKQEN  480
STASSAKMQM PKVKLGERIT ALQQIVSPFG KTDTASVLYE AIQYIKFLQE QVKVIIF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024019427.11e-179transcription factor mef2A
TrEMBLA0A2P5E0U00.0A0A2P5E0U0_PARAD; Myc-type, basic helix-loop-helix (BHLH) domain containing protein
STRINGXP_010093361.11e-179(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.16e-23bHLH family protein