PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G026340.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 83aa    MW: 8980.29 Da    PI: 11.7986
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G026340.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.17e-121758445
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                           k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  HL.SW.v1.0.G026340.1 17 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDL 58
                          6889*************************9877777776666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.5E-61477IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-91560No hitNo description
PROSITE profilePS502179.1861660IPR004827Basic-leucine zipper domain
PfamPF001703.0E-91759IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.31E-81860No hitNo description
PROSITE patternPS0003602136IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
MLQRKGAGST SEKPLDAKTL RRLAQNREAA RKSRLRKKAY VQQLESSRIK LTQLEQDLQR  60
ARAQGLFLGA CGGASGNISP GN*
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2296772e-69KP229677.1 UNVERIFIED: Boehmeria nivea Basic leucine zipper transcription factor-like (bZIP11) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015872803.11e-41transcription factor TGA9 isoform X2
RefseqXP_024926305.11e-41transcription factor TGA9 isoform X1
RefseqXP_024926306.11e-41transcription factor TGA9 isoform X1
RefseqXP_024926307.11e-41transcription factor TGA9 isoform X3
RefseqXP_024926308.11e-41transcription factor TGA9 isoform X2
RefseqXP_024926309.11e-41transcription factor TGA9 isoform X3
SwissprotQ93XM62e-31TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1Q3D8471e-39A0A1Q3D847_CEPFO; BZIP_1 domain-containing protein/DOG1 domain-containing protein
STRINGXP_010089829.14e-40(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1588759
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.22e-34bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]