PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G021363.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bHLH
Protein Properties Length: 176aa    MW: 20220.7 Da    PI: 5.3331
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G021363.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-1090137455
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                   HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +h+  Er RR++iN+++  L++l+P +    +k   Ka +L + ++Y++sLq
  HL.SW.v1.0.G021363.1  90 SHSLSERLRRQKINERMKFLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 137
                           89************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.95886136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-1788151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.49E-1189141No hitNo description
Gene3DG3DSA:4.10.280.101.4E-1789149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.1E-890137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-1092142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MNRNYKGFHG DSGGFECGYY DDEIQSLLNF PSSYWSVPSQ PLELDHRPFK NGKSSEEKNE  60
DQKIIKVACS TSQNNRELKT DQEEVTTISS HSLSERLRRQ KINERMKFLQ DLVPGCNKVT  120
GKALMLDEII NYVQSLQRQV EFLSMKLATY SEMEVFDMGP LLSEDKVSYT NIHYS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A287N5M73e-33A0A287N5M7_HORVV; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3703422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.22e-35bHLH family protein