PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G014223.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bHLH
Protein Properties Length: 208aa    MW: 23513.6 Da    PI: 10.2405
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G014223.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.6e-082166754
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
                   HLH  7 erErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                           +E++RR +++   ++L +l+P+    +sk  l+  + L +A  YI +L
  HL.SW.v1.0.G014223.1 21 TVEKNRRIHMKGLCFKLASLVPSH---HSKVmLTQQDQLDLAASYITQL 66
                          69*********************7...56666***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.1121466IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.74E-41670No hitNo description
SuperFamilySSF474591.31E-101981IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-101980IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.1E-52166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MVMKMKNSTS ETTASKLDRR TVEKNRRIHM KGLCFKLASL VPSHHSKVML TQQDQLDLAA  60
SYITQLRERI DKLKKRKEQA MMMPPPPAPP SISRGISSST NNMNNRIRND IVLDLAMRPH  120
PHGMMLPVIE LKDMGCSIEV VLISGLHKNF MLYEIISVLE QEGAEVVSAS LSVVDDKIFH  180
TLHAQVKLSR VGVETSRVWQ RLQDLIY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17075DKLKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010101195.28e-87transcription factor bHLH162
TrEMBLA0A2P5F6H21e-95A0A2P5F6H2_TREOI; Basic helix-loop-helix transcription factor
STRINGXP_010101195.19e-86(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-31bHLH family protein