PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G011876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | G2-like | ||||||||
Protein Properties | Length: 116aa MW: 12687.4 Da PI: 10.4807 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 27.7 | 6.2e-09 | 88 | 111 | 2 | 25 |
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 r+ Wtp LHe+F++a++ LGG+e HL.SW.v1.0.G011876.1 88 SRRIWTPHLHESFIKALNVLGGPE 111 6999******************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.8E-5 | 86 | 111 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence Send to blast |
MISRNYKRMV AAAAAESEKK NGKRGGSDDG DEKMVKLKRS GSVIKEMNEM IHGGGVMLNQ 60 PQHQGGSGHQ FQAEQHAVFL DATWKSTSRR IWTPHLHESF IKALNVLGGP EGFAR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |