PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G009901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | G2-like | ||||||||
Protein Properties | Length: 83aa MW: 9010.12 Da PI: 4.4831 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 40.5 | 6.1e-13 | 59 | 83 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt eLHerFv+av+qLGG++ HL.SW.v1.0.G009901.1 59 KPRLRWTGELHERFVDAVTQLGGPD 83 79*********************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.4E-11 | 56 | 83 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-7 | 59 | 83 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence Send to blast |
MSPEEYGLEV GRMVSWRMYS AIHSLPLDGV VGGHGDFQGS LDGTNLPGDA CLVLTTDPKP 60 RLRWTGELHE RFVDAVTQLG GPD |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028102122.1 | 4e-39 | protein PHR1-LIKE 3-like | ||||
Swissprot | Q94A57 | 5e-33 | PHL2_ARATH; Protein PHR1-LIKE 2 | ||||
TrEMBL | A0A2P5CRT1 | 1e-39 | A0A2P5CRT1_PARAD; Octamer-binding transcription factor | ||||
TrEMBL | A0A2P5F3X6 | 1e-39 | A0A2P5F3X6_TREOI; Octamer-binding transcription factor | ||||
STRING | XP_008224497.1 | 7e-38 | (Prunus mume) | ||||
STRING | EMJ26761 | 8e-39 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15413 | 9 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 2e-35 | G2-like family protein |
Publications ? help Back to Top | |||
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