PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G008728.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family BES1
Protein Properties Length: 324aa    MW: 34872.7 Da    PI: 8.3896
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G008728.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822217.33.6e-6721481149
                DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 
                           ++++r+ptwkErEnnkrRERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+++++++g s+sas
  HL.SW.v1.0.G008728.1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPMDRMDIMGGSTSAS 90 
                           5899************************************************************************************* PP

                DUF822  90 pesslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149
                           p+ss+q        +sp++sy++sp++ssfpsp+s+  + + ++      +sl+p+l++l++ sss
  HL.SW.v1.0.G008728.1  91 PCSSYQ--------PSPCASYNPSPATSSFPSPVSSHYTANVNSnnnadpNSLIPWLKTLTSGSSS 148
                           ******........888888888888888888877665444333356777********99887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.1E-683142IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI YSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEEDGTTY RKGCKPMDRM DIMGGSTSAS PCSSYQPSPC ASYNPSPATS SFPSPVSSHY  120
TANVNSNNNA DPNSLIPWLK TLTSGSSSAT SKFPHHLFIH SGSISAPVTP PLSSPTCRTP  180
RNKNEWDDPM VASQNNPFQP SSNPQSPGRQ VLPDSNWLAG IQSGPSSPTF SLVSRNPFGF  240
KDEALSNGGS RMWTPGQSGT CSPAIAAGLD NTSDIPMSDG NIAGAEFAFG SNTTGLVKPW  300
KGERIEECVS DDLELTLGNA TTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-25677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-25677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-25677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-25677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.11e-170PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-128BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A498JVF11e-161A0A498JVF1_MALDO; Uncharacterized protein
STRINGXP_009352718.11e-170(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-120BES1/BZR1 homolog 4