PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G001543.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family BES1
Protein Properties Length: 318aa    MW: 34171.1 Da    PI: 8.9876
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G001543.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822219.95.7e-6851471147
                DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 
                           ++sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqGnyklpk++DnneVlkALc eAGwvvedDGttyrkg++p+   + +++s+++s
  HL.SW.v1.0.G001543.1   5 ASSGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGNYKLPKHCDNNEVLKALCSEAGWVVEDDGTTYRKGTQPP-PVDFGVASTNIS 92 
                           589*************************************************************************.99********** PP

                DUF822  90 pesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvs 147
                           ++ss+q s++ss+++spv+sy+asp+sssfpsp+++d ++++    llp+l++ ++++
  HL.SW.v1.0.G001543.1  93 TCSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRFDGNPSS---YLLPFLRNIAAIP 147
                           ***************************************985...8999999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.2E-646130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MTGAASSGRL PTWKERENNK RRERRRRAIA AKIYSGLRAQ GNYKLPKHCD NNEVLKALCS  60
EAGWVVEDDG TTYRKGTQPP PVDFGVASTN ISTCSSIQPS PQSSSFPSPV PSYHASPTSS  120
SFPSPTRFDG NPSSYLLPFL RNIAAIPTNL PHLRISNSAP VTPPLSSPTS RGSKPKPDWE  180
SFSNGSLQAL RHPLFAASAP SSPTRRHHFT HATIPECDES DASTVDSGRW VSMQTGAPSV  240
APPSPTFNLI KPVAQQSVLQ DAVGGHGPVG WGIPADMARG PEFDFENGRV KPWEGERIHD  300
IAVDDLELTL GSGKARC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-25981372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-25981372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-25981372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-25981372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024020611.11e-163BES1/BZR1 homolog protein 2
SwissprotQ94A431e-115BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A2P5FXR81e-169A0A2P5FXR8_TREOI; BZR transcription factor
STRINGXP_009349751.11e-160(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-90BES1 family protein