PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G001308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | bZIP | ||||||||
Protein Properties | Length: 455aa MW: 49048.8 Da PI: 9.7814 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.5 | 3.4e-14 | 377 | 427 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r rr++kNRe+A rsR+RK+a++ eLe ++++L++ N++L k+ ee ++ HL.SW.v1.0.G001308.1 377 RRHRRMIKNRESAARSRARKQAYTLELEAEIAKLKEVNEELLKKQEEFMEM 427 689***************************************999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.3E-10 | 372 | 435 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.185 | 375 | 426 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.15E-10 | 377 | 426 | No hit | No description |
CDD | cd14707 | 1.64E-26 | 377 | 431 | No hit | No description |
Pfam | PF00170 | 3.2E-12 | 377 | 427 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.9E-13 | 377 | 426 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 380 | 395 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence Send to blast |
MGSHMNFNGF GDDPLGGNNG GGGKPIGNNN MLARQSSVYS LTFDEFQNTI GGYGKDFGSM 60 NMDELLKNIW TAEETQILAS SVGMGGEGGG SSSGGGVTTN GNIQRQGSLT LPRTLSQRTV 120 DEVWRDLFKD SDNGAKFGSS NGTSGEANMP HRQPTLGEMT LEEFLVRAGI VREDAQEIGR 180 PSITNGSNNN TNALAFEFQQ PSRNNGFVDN QLAPMTNPTT NRPLNLPMNN GGVRSSQQVQ 240 MQQQQQQQQL TPQQRQQPLY PKPATLAFAP PIHLVSNAQL TSPTTRENIV GVGEPAVSSA 300 LVQARGLQQG RGGISSMANV GAATGVTVGS RSPANHISSN VVAKANAVDS SPSVSPVPYM 360 FSRGGKCGPG LEKVIERRHR RMIKNRESAA RSRARKQAYT LELEAEIAKL KEVNEELLKK 420 QEEFMEMQKV QILETMNGWG SKRQCLRRTL TGPW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00038 | PBM | Transfer from AT4G34000 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024028907.1 | 1e-171 | bZIP transcription factor 46 | ||||
Swissprot | Q9M7Q3 | 1e-105 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A2P5E927 | 0.0 | A0A2P5E927_TREOI; Basic-leucine zipper transcription factor | ||||
STRING | XP_004294799.1 | 1e-161 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1962 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 5e-80 | abscisic acid responsive elements-binding factor 3 |