PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KDD75526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales
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Family | CAMTA | ||||||||
Protein Properties | Length: 151aa MW: 17451.9 Da PI: 8.3277 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 130.4 | 6.8e-41 | 30 | 145 | 3 | 115 |
CG-1 3 kekkrwlkneeiaaiLe...nfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrc 98 k k wlkn ei +iL+ + + +l+ e++ +p+ g l+L +rk r+fr+DG++w+kkkdg++v+E+hekLKv e l+cyYahs+ + +qrr+ KDD75526.1 30 KAKDSWLKNAEIFRILTclwDGAVVDLAREAPVQPEGGLLFLVDRKSCRNFRRDGHHWRKKKDGRAVKETHEKLKVADEERLNCYYAHSDLEDALQRRS 128 45899***********9654455666777********************************************************************** PP CG-1 99 ywlLeeelekivlvhyl 115 ywlL+e++++ vl+hyl KDD75526.1 129 YWLLDEQRDSAVLMHYL 145 ****************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 47.084 | 24 | 151 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 9.2E-40 | 27 | 148 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 1.6E-39 | 31 | 145 | IPR005559 | CG-1 DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071275 | Biological Process | cellular response to aluminum ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
MARARSGGGP LPLQESDPSL PEDVRALISK AKDSWLKNAE IFRILTCLWD GAVVDLAREA 60 PVQPEGGLLF LVDRKSCRNF RRDGHHWRKK KDGRAVKETH EKLKVADEER LNCYYAHSDL 120 EDALQRRSYW LLDEQRDSAV LMHYLCSYVT R |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00043 | PBM | Transfer from AT5G64220 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_005850100.1 | 6e-45 | hypothetical protein CHLNCDRAFT_142166 | ||||
Refseq | XP_011401233.1 | 6e-45 | Triacylglycerol lipase SDP1 | ||||
TrEMBL | A0A059LMW7 | 1e-107 | A0A059LMW7_9CHLO; CG-1 domain-containing protein (Fragment) | ||||
STRING | A0A087SR66 | 2e-44 | (Auxenochlorella protothecoides) | ||||
STRING | XP_005850100.1 | 2e-44 | (Chlorella variabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP5132 | 8 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09410.1 | 3e-34 | ethylene induced calmodulin binding protein |