PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KDD74652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales
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Family | NF-YB | ||||||||
Protein Properties | Length: 169aa MW: 18041.4 Da PI: 4.7515 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 37.6 | 5.4e-12 | 40 | 108 | 23 | 91 |
NF-YB 23 anakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 ++a++skd e + fi f+t+ a+d +++ kr ti+ dd++ al +l + + vepl+ l++ + KDD74652.1 40 KDAQLSKDVLLAFSEAARVFIHFLTATANDLAKERKRSTIAVDDVIAALNELDLAELVEPLTESLQELK 108 46788899999999************************************************9998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.20.10 | 1.7E-24 | 11 | 132 | IPR009072 | Histone-fold |
SuperFamily | SSF47113 | 1.18E-19 | 14 | 132 | IPR009072 | Histone-fold |
Pfam | PF00808 | 1.9E-7 | 41 | 88 | IPR003958 | Transcription factor CBF/NF-Y/archaeal histone domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
MATAVAADAC DGEIPKALLK RLLKAKLSSL DAARGITSVK DAQLSKDVLL AFSEAARVFI 60 HFLTATANDL AKERKRSTIA VDDVIAALNE LDLAELVEPL TESLQELKAE AALKSKRKAE 120 NAKRKADAGS PSPTPETDVE AGADGKRARA LEPDREIADA YKSAEEDEQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011400229.1 | 1e-27 | SPX domain-containing protein 2 | ||||
TrEMBL | A0A059LJZ8 | 1e-112 | A0A059LJZ8_9CHLO; Uncharacterized protein | ||||
STRING | A0A087SNF8 | 5e-27 | (Auxenochlorella protothecoides) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP3453 | 13 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 6e-21 | nuclear factor Y, subunit B11 |