PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KDD73610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales
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Family | AP2 | ||||||||
Protein Properties | Length: 249aa MW: 27585.8 Da PI: 10.2852 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.3 | 2.1e-09 | 59 | 107 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ykGV+ + +++r +A+I++ + ++++lg fgta eAa a + +++l KDD73610.1 59 EYKGVTHHVRTKRHEAHIWEG-----QpgRQIYLGGFGTATEAALAFDILALRL 107 59******************4.....456*****************99999887 PP | |||||||
2 | AP2 | 38.4 | 3.1e-12 | 150 | 200 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++ +grW+++I g r++ +lg ++t+ eAa+a+++a+ + +g KDD73610.1 150 SFFRGVTRHA-KGRWESRIGQaS---G-RRYLYLGLHDTEVEAAQAYDRAAIAQRG 200 579****998.7******88833...3.6**********99**********99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 10.296 | 59 | 117 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-9 | 59 | 121 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.5E-8 | 59 | 115 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.02E-9 | 60 | 115 | IPR016177 | DNA-binding domain |
SuperFamily | SSF54171 | 3.73E-14 | 150 | 209 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.9E-21 | 151 | 214 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 14.091 | 151 | 208 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.0E-15 | 152 | 208 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-5 | 152 | 163 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.4E-8 | 152 | 200 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.92E-19 | 152 | 207 | No hit | No description |
PRINTS | PR00367 | 1.2E-5 | 190 | 210 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MRASHSSRSS RRESSPAMVL TRKRSRGRES SVGCYGDGAG ESPDEVRAVR RATPNPTTEY 60 KGVTHHVRTK RHEAHIWEGQ PGRQIYLGGF GTATEAALAF DILALRLGRR ETNFHASHYA 120 PYLESLMAHA PHELVAGLRR QSKGSAQQSS FFRGVTRHAK GRWESRIGQA SGRRYLYLGL 180 HDTEVEAAQA YDRAAIAQRG LEAQTNFHIA EYLAELAPDL QRKARARGML DDLPALPAPT 240 RSSEEAETA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011395646.1 | 4e-89 | Floral homeotic protein APETALA 2 | ||||
TrEMBL | A0A059LHN0 | 1e-180 | A0A059LHN0_9CHLO; Uncharacterized protein (Fragment) | ||||
STRING | A0A087SAM7 | 2e-88 | (Auxenochlorella protothecoides) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP56 | 16 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 5e-33 | AP2 family protein |