PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KDD73540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales
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Family | AP2 | ||||||||
Protein Properties | Length: 160aa MW: 17374.7 Da PI: 10.5312 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.6 | 4.2e-15 | 33 | 89 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ng.krkrfslgkfgtaeeAakaaiaarkklege 56 s y GV+++k++gr++A+I+ + e +g k + +lg++ tae+Aa+ +++a+++l+g+ KDD73540.1 33 SPYIGVTQYKRTGRYEAHIWIV-EmRGaKGHQRHLGSYATAEDAARCYDRAALRLRGP 89 6799*****************5.6699999999***********************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 2.16E-14 | 33 | 97 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 15.027 | 34 | 96 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.5E-22 | 34 | 102 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.57E-15 | 35 | 96 | No hit | No description |
Pfam | PF00847 | 4.4E-8 | 35 | 88 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.1E-15 | 35 | 97 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MEVPACTDVG ALGVSGAVAP VKRRRSGPKS KSSPYIGVTQ YKRTGRYEAH IWIVEMRGAK 60 GHQRHLGSYA TAEDAARCYD RAALRLRGPG AELNFPLEDY SEDPFLIAHS KVDKFRFLDL 120 LRAEFAIQSD RPSSFAARAR AGASPSSRRG STPAARGLPG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011400550.1 | 6e-56 | AP2-like ethylene-responsive transcription factor AIL1 | ||||
TrEMBL | A0A059LHE7 | 1e-112 | A0A059LHE7_9CHLO; Uncharacterized protein (Fragment) | ||||
STRING | A0A087SPB3 | 2e-55 | (Auxenochlorella protothecoides) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP5751 | 6 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G39250.1 | 6e-17 | AP2 family protein |