PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KDD72573.1
Organism
Helicosporidium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales
Family G2-like
Protein Properties Length: 354aa    MW: 36919.9 Da    PI: 8.8504
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KDD72573.1genomeUBCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.39.6e-30151555
     G2-like  5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                rWtp+LH+rFv av +LGGse AtPk i++lm v+gLt++h+kSHLQkYRl
  KDD72573.1  1 RWTPDLHARFVAAVGHLGGSESATPKGIMKLMMVEGLTIYHIKSHLQKYRL 51
                7*************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466899.68E-15153IPR009057Homeodomain-like
PROSITE profilePS5129414.546154IPR017930Myb domain
PfamPF002494.4E-6150IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.1E-27152IPR009057Homeodomain-like
TIGRFAMsTIGR015574.6E-22151IPR006447Myb domain, plants
PfamPF143798.7E-13257299IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0016036Biological Processcellular response to phosphate starvation
GO:0055063Biological Processsulfate ion homeostasis
GO:0071486Biological Processcellular response to high light intensity
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
RWTPDLHARF VAAVGHLGGS ESATPKGIMK LMMVEGLTIY HIKSHLQKYR LNGKPMDGSG  60
LARSDSGERR AKGRVRRSGE SASDASEGLG PRHSKHARPG GVEAGGRLQM AESDSSMDAA  120
GAVPGPASSS LPASARSKAK NGLLRLGDPL AEPQVSLQQR QPSHAAVLSM HGMPPGMPLS  180
HPPPQLLPGY LPEDPGLVVL APPSLEGSFG ALAPPHLPLS HATSTHDLLP PSGPFEASSA  240
YSLAPMQTRS DPAVLERALA VQMDMQRKLY EQLEAQRRLQ LEMETHGRYI TSLLAETQQG  300
GAEAEQGRAD AAGLLPLQGP LASALPSPLH SPGGGLGHGP GALSHALAHP SLMG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-21150655Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-21150655Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-21150554Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-21150554Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-21150554Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-21150554Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-21150655Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-21150655Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-21150655Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-21150655Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-21150655Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-21150655Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A059LE440.0A0A059LE44_9CHLO; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1111645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.13e-21phosphate starvation response 1