PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Han008247 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | HB-other | ||||||||
Protein Properties | Length: 139aa MW: 15147.8 Da PI: 5.3061 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.5 | 1.3e-09 | 95 | 139 | 2 | 46 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkv 46 +k+ ++tk q Lee+F+ + +++ ++++eLA+ l+L rqV v Han008247 95 KKKLRLTKAQSGLLEEAFKLHTTLNPKQKQELARDLKLRPRQVEV 139 677899*************************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-8 | 83 | 139 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.99E-8 | 88 | 139 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 9.135 | 91 | 139 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 3.6E-7 | 95 | 139 | IPR001356 | Homeobox domain |
CDD | cd00086 | 4.61E-7 | 95 | 139 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence Send to blast |
FHTFANTELA LELGLNPTLS MAENTTNPTK KPNPSSDHPL EPNLTLALSG DSCGGSSFSN 60 ACVKREREVA SDESGERGVE NTSGEEDEDG GVNCKKKLRL TKAQSGLLEE AFKLHTTLNP 120 KQKQELARDL KLRPRQVEV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022005306.1 | 8e-95 | homeobox-leucine zipper protein HAT22-like isoform X2 | ||||
Swissprot | P46604 | 2e-26 | HAT22_ARATH; Homeobox-leucine zipper protein HAT22 | ||||
TrEMBL | Q39932 | 1e-95 | Q39932_HELAN; Homeodomain protein (Fragment) | ||||
STRING | XP_009796334.1 | 7e-28 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 7e-29 | HD-ZIP family protein |
Publications ? help Back to Top | |||
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