PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Han007706 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | bHLH | ||||||||
Protein Properties | Length: 183aa MW: 20455.7 Da PI: 6.2856 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.5 | 3e-05 | 132 | 170 | 13 | 55 |
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R+++++ Lr ++P + ++ +++L +Av+Y+ksL+ Han007706 132 REKMKKMVKSLRGIVPGG----NAEMNTVDVLDEAVKYLKSLK 170 8899999999******97....799***************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.902 | 119 | 169 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-7 | 131 | 176 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.06E-8 | 132 | 177 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.56E-4 | 132 | 172 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
RGPTYFPHIK IKRLVFGQNV TSSIKGLPEK LRNFDRADNC NQVMYTPGIN TAPMQKDKYT 60 PRVTEEDSAD IDALLSYDDE DENEEYEDDE VSTARTYGDD TYDTSDSCSS RRRNKWVGST 120 SSHGSKGSSG KREKMKKMVK SLRGIVPGGN AEMNTVDVLD EAVKYLKSLK VEAHKMGFGN 180 LPG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021980814.1 | 5e-82 | transcription factor bHLH144-like | ||||
TrEMBL | A0A251V0E7 | 2e-66 | A0A251V0E7_HELAN; Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein | ||||
STRING | Migut.H01376.1.p | 1e-29 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.2 | 9e-11 | bHLH family protein |