PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Han007514 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | bHLH | ||||||||
Protein Properties | Length: 194aa MW: 21816.4 Da PI: 5.2136 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.9 | 7.7e-13 | 78 | 124 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE++RRd++N++f+eL e+l + +s+K +K iL A++ + +L Han007514 78 KACREKKRRDKLNDRFQELNEILDPG---RSTKTDKTVILADAIRMVTQL 124 678**********************9...9***************99988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 6.22E-9 | 71 | 127 | No hit | No description |
PROSITE profile | PS50888 | 13.224 | 73 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.27E-13 | 78 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.4E-10 | 78 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.5E-13 | 78 | 146 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.4E-10 | 79 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MAAPAESDNS NCFFDFSLIE QFSVPGGELP SLEPEFQWSS DPFSEHSKGF ADTYGKLNVP 60 KEDESRKRAN PGSCSDSKAC REKKRRDKLN DRFQELNEIL DPGRSTKTDK TVILADAIRM 120 VTQLRNEAAK LKDSSEDLLV KINELKVEKN ELRDEKQKLK SEKEKLETQL XAACCHPPPP 180 AFYPPVMPVP CPGP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 85 | RKRANPGSCSDSKACREKKRR |
2 | 82 | 87 | KKRRDK |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Han.3592 | 0.0 | embryo |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Widely expressed throughout development, mostly in vasculatures. {ECO:0000269|PubMed:17028341}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes. {ECO:0000269|PubMed:17028341}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022036985.1 | 1e-138 | transcription factor bHLH115-like | ||||
Swissprot | Q9FH37 | 2e-45 | ILR3_ARATH; Transcription factor ILR3 | ||||
TrEMBL | A0A251ULG8 | 1e-136 | A0A251ULG8_HELAN; Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein | ||||
STRING | XP_002518568.1 | 7e-59 | (Ricinus communis) | ||||
STRING | XP_004309656.1 | 8e-59 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51070.1 | 4e-36 | bHLH family protein |