PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Han002534 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | bZIP | ||||||||||||
Protein Properties | Length: 252aa MW: 28309.9 Da PI: 4.7219 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.6 | 2.6e-08 | 119 | 174 | 4 | 59 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 k+ +r +NR AA rsR+RKk+ ++ Le k+ e+e ++L + l+ + e ++l Han002534 119 AKKRKRQLRNRDAALRSRERKKMHVKDLELKSRYYEGECRRLGSLLQWYMAENQAL 174 7999*********************************9999999888888887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.2E-10 | 108 | 178 | No hit | No description |
SMART | SM00338 | 1.8E-7 | 111 | 180 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.174 | 118 | 175 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.0E-7 | 119 | 175 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.63E-10 | 120 | 178 | No hit | No description |
CDD | cd14704 | 7.53E-13 | 121 | 172 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
XLLLLLLNNN LINLHLQFHR MEDWDNLFDF DLTFPTDDDV IIPPDDDVNN QSPPLSVDDI 60 EQLLFKDDDD DQLPTDAFLD DILLDSPLQE EKSGEVVDCS DSAEDQKNEE EKDDDDPLAK 120 KRKRQLRNRD AALRSRERKK MHVKDLELKS RYYEGECRRL GSLLQWYMAE NQALRFSLHS 180 SSSNASMTKQ ESAXALVGIP AGGFPALVNG HNGCPSQPCT TTSAAPPKSK STGNRGRRKA 240 STKSGSKEKG RG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 139 | KRKRQLRNRDAALRSRERKK |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Han.5525 | 0.0 | embryo| leaf |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022008590.1 | 1e-100 | bZIP transcription factor 60 | ||||
TrEMBL | A0A251SDC6 | 5e-99 | A0A251SDC6_HELAN; Putative basic-leucine zipper domain-containing protein | ||||
STRING | POPTR_0005s27930.1 | 2e-40 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 5e-15 | basic region/leucine zipper motif 60 |