PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Han002438 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | bZIP | ||||||||||||
Protein Properties | Length: 255aa MW: 28755.9 Da PI: 9.7709 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.3 | 1.1e-15 | 185 | 228 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+ e Han002438 185 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLRRE 228 79***************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-14 | 179 | 228 | No hit | No description |
PRINTS | PR00041 | 4.6E-5 | 180 | 196 | IPR001630 | cAMP response element binding (CREB) protein |
SMART | SM00338 | 1.1E-13 | 181 | 253 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.84 | 183 | 228 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.75E-11 | 185 | 230 | No hit | No description |
CDD | cd14707 | 8.05E-18 | 185 | 215 | No hit | No description |
Pfam | PF00170 | 3.8E-13 | 185 | 229 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 188 | 203 | IPR004827 | Basic-leucine zipper domain |
PRINTS | PR00041 | 4.6E-5 | 198 | 218 | IPR001630 | cAMP response element binding (CREB) protein |
PRINTS | PR00041 | 4.6E-5 | 218 | 235 | IPR001630 | cAMP response element binding (CREB) protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
XLDELLKSVY SAETNQGTSS NAVNYTELNS GVTKKTVDEV WQDIQQGQRK KKNDSDDDGS 60 NVSKGGSFKS GDGKRQRTLG EMTLEDFLVK AGVVAESSPG KVNEEGNLEP QETQWIGYQS 120 HAVQQQNMIM AGHYQVQPSV TVPGNSLMDV GYMSPTSLMG SLSDRHMSGR KRFASGDVME 180 KTVERRQKRM IKNRESAARS RARKQAYTHE LENKVSRLEE ENERLRREKE VEKVIPWVPP 240 PKPKYQLRRT SSAPF |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. | |||||
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021988247.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 5e-73 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A251TJ82 | 0.0 | A0A251TJ82_HELAN; Putative ABA-responsive element binding protein 3 | ||||
STRING | XP_009614068.1 | 5e-86 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-51 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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