PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Han002321 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | Dof | ||||||||||||
Protein Properties | Length: 260aa MW: 28322.2 Da PI: 10.7178 | ||||||||||||
Description | Dof family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 120.2 | 7.5e-38 | 2 | 58 | 6 | 62 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 l+cprCdstntkfCy+nny+l+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+ss Han002321 2 LNCPRCDSTNTKFCYFNNYNLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSS 58 68****************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 29.758 | 2 | 56 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 8.4E-32 | 2 | 56 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 1.0E-21 | 2 | 47 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 4 | 40 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
XLNCPRCDST NTKFCYFNNY NLTQPRHFCK TCRRYWTRGG ALRNVPVGGG CRRNKRSSKS 60 RSSKSPRQSG PKSVSVSPPR STNSDMTSTQ LSRPPSLHLP FMSSLSQFGG VGGNLSSNLA 120 GFQPPSDQMG NFQMGNGNIL SIGGGDNWRL PFLPGFEVPN NNNNNLFNYQ TEGVGAQSSS 180 MVGGDTRLKS SSGIDNPSEG SVKMEDNRGL NLSRQFLGML GNTTNQQAWN GKHSWGEFPG 240 VSPSTTHFPI LRKIDQSNVA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022013220.1 | 1e-176 | dof zinc finger protein DOF5.1-like | ||||
TrEMBL | A0A251SCT0 | 1e-175 | A0A251SCT0_HELAN; Putative zinc finger, Dof-type | ||||
STRING | Aquca_003_00022.1 | 1e-56 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28810.2 | 1e-30 | Dof family protein |