PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN48784.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 342aa    MW: 38439.2 Da    PI: 4.3646
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN48784.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.4e-194291255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  KHN48784.1 42 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLHG 91
                789******.7*********33....35***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.57E-314198No hitNo description
PfamPF008471.3E-134291IPR001471AP2/ERF domain
PROSITE profilePS5103219.2824299IPR001471AP2/ERF domain
SMARTSM003802.1E-3342105IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-274298IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-194299IPR016177DNA-binding domain
PRINTSPR003674.4E-84354IPR001471AP2/ERF domain
PRINTSPR003674.4E-86581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MARKRKVVEV VEEGELCEGT LGWDEMMKQA AALGGVQRAR KRFVGVRQRP SGRWVAEIKD  60
TIQKIRVWLG TFDTAEEAAR AYDEAACLLH GANMRTNFWP CSQSSTSPAL SSKITNLLLQ  120
RLKERNNNNN NACSSSSSSS TSLLINHQQM QHHQQVDAYG EGSTQFSIDQ FTDFLNDPED  180
YSTSNNDFIN NTAQIDYITS SFESCLTKKD GGTKMDMQLQ YKSSNVTPQT SSNDSNSGVV  240
ESEEEGNDLG VQSTKDSEEE GNDLGVQSTN LDVHDFRFLD NIAPPSYYSP FEMAEEMEEE  300
PVEPENENYD DEPSMLRAVM KRMTYERKFS ASLYAFNGYL NA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN48784.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543860.10.0ethylene-responsive transcription factor ERN2
RefseqXP_028197038.10.0ethylene-responsive transcription factor ERN2-like
TrEMBLA0A0B2SW990.0A0A0B2SW99_GLYSO; Ethylene-responsive transcription factor RAP2-11
STRINGGLYMA13G05690.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-20related to AP2 11
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]