PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN48577.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 288aa    MW: 31777.8 Da    PI: 6.7511
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN48577.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2271.1e-0821562655
         AP2 26 g......krkrfslgkfgtaeeAakaaiaarkkleg 55
                g      kr+r +lg+f tae+Aa+a+++a+  l+g
  KHN48577.1 21 GktreprKRTRKWLGTFATAEDAARAYDRAAIILYG 56
                334456456**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.722164IPR001471AP2/ERF domain
PfamPF008473.8E-51152IPR001471AP2/ERF domain
SMARTSM003805.8E-142070IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-112264IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.8E-162364IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MQGTIEIKIL RWQCNNELLS GKTREPRKRT RKWLGTFATA EDAARAYDRA AIILYGSRAQ  60
LNLQPSGSSS QSSSSRSSSS STQTLRPLLP RPSGFSVNFP FNTATVPYPY NNSHNYTYSP  120
PVLCPNDNHN NNIVQVHHPH HHRCPEELVQ VQVAHTLSTS YQHNSESDVG LGVNNNVFVV  180
DGSIRSTSYQ RHGFLDSNNN HVHVQVQHGV LSNQQQQQHQ NGVVVEGVNN SPVVGSVASA  240
MDASSVDPDL ALVGTVGLGS SSPFWSMANE DDYTGSLWDY NDPFFFDL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN48577.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358820.0AC235882.2 Glycine max clone GM_WBc0011M13, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028199699.10.0ethylene-responsive transcription factor ABI4-like isoform X2
TrEMBLA0A0B2SWC60.0A0A0B2SWC6_GLYSO; Ethylene-responsive transcription factor ABI4
STRINGGLYMA14G06290.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF88472940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-14ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]