PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN48184.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 176aa    MW: 19779.3 Da    PI: 10.3347
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN48184.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.36e-111850238
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgt 38
                +y+GVr++  +g+Wv+eIr+p+    +  r++lg+f t
  KHN48184.1 18 RYRGVRRRN-SGKWVSEIREPK----KpNRIWLGTFPT 50
                69****888.8*********94....468*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.2E-151851IPR001471AP2/ERF domain
SMARTSM003805.4E-41857IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-81851IPR016177DNA-binding domain
PfamPF008478.1E-51850IPR001471AP2/ERF domain
PROSITE profilePS5103213.9731850IPR001471AP2/ERF domain
CDDcd000182.39E-151951No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MYSGNATSSS RGSSESGRYR GVRRRNSGKW VSEIREPKKP NRIWLGTFPT PWRRWPMTWL  60
RWLSRVRMLG STSLTQLLPF LSPLRFLHAT AAAAAAAGAA KDSMRTQTGN YNISEGQENQ  120
TGMGNQFVDE DLIFDMPNVL VNMAQGMLLS PPPFDIGLEP NSPENTEQET SLWNFP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN48184.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028197171.17e-75ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR03e-24ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A445HGJ02e-73A0A445HGJ0_GLYSO; Ethylene-responsive transcription factor ERF024
STRINGGLYMA13G21560.24e-73(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.17e-21ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]