PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KHN48176.1

Organism

Glycine soja

Taxonomic ID

3848

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

VOZ

Protein Properties

Length: 459aa MW: 51163.1 Da PI: 6.1453

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN48176.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	436.3	4e-134	193	410	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rp+qg +w+qdycssfha+lalneg+pg+tpvlrp+gi+lkd+llfaalsak+qgk vgipecegaatakspwna+elfd++ KHN48176.1 193 PPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAQGKVVGIPECEGAATAKSPWNAPELFDIC 291 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp++ fewhlyeyei+++d +alyrlelklvd+kks+k+ KHN48176.1 292 VLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDVCALYRLELKLVDGKKSSKA 390 ************************************************************************************************* PP VOZ 199 k.vskdsladlqkklgrlta 217 k v+ ds+adlqk++g+l+a KHN48176.1 391 KiVTGDSVADLQKHMGSLSA 410 5578***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence Send to blast
MKKISKSSCK LASHRLFKDK ARNHVDDLQV MFLDLQFARK ESRTIDAALL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSTDVYRL LQLCEEEDDA TSPLVAPKPE PNDQIMQAGA 120 KVIVQEGQHQ QELLLLKECK PFTVGFPNLD GTALEYHQFD INKDMDDSFY AGTGFCEEGR 180 VPHISSYLPS VCPPPSAFLG PKCALWDCPR PVQGLDWCQD YCSSFHAALA LNEGPPGMTP 240 VLRPGGIGLK DNLLFAALSA KAQGKVVGIP ECEGAATAKS PWNAPELFDI CVLEGETIRE 300 WLFFDKPRRA FESGNRKQRS LPDYSGRGWH ESRKQVMNEF GGLKRSYYMD PQPLNLFEWH 360 LYEYEISKCD VCALYRLELK LVDGKKSSKA KIVTGDSVAD LQKHMGSLSA KGSRTKLGIG 420 GGVYSASNRV ALLNAPYQYG LTSPYDDYVV HNTLDYYVT

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence Send to blast

MKKISKSSCK LASHRLFKDK ARNHVDDLQV MFLDLQFARK ESRTIDAALL EEQVHQMLRE  60
WKAELNEPSP ASSLQQGGSL GSFSTDVYRL LQLCEEEDDA TSPLVAPKPE PNDQIMQAGA  120
KVIVQEGQHQ QELLLLKECK PFTVGFPNLD GTALEYHQFD INKDMDDSFY AGTGFCEEGR  180
VPHISSYLPS VCPPPSAFLG PKCALWDCPR PVQGLDWCQD YCSSFHAALA LNEGPPGMTP  240
VLRPGGIGLK DNLLFAALSA KAQGKVVGIP ECEGAATAKS PWNAPELFDI CVLEGETIRE  300
WLFFDKPRRA FESGNRKQRS LPDYSGRGWH ESRKQVMNEF GGLKRSYYMD PQPLNLFEWH  360
LYEYEISKCD VCALYRLELK LVDGKKSSKA KIVTGDSVAD LQKHMGSLSA KGSRTKLGIG  420
GGVYSASNRV ALLNAPYQYG LTSPYDDYVV HNTLDYYVT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN48176.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015038	1e-157	AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006594201.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_028195785.1	0.0	transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A0R0HKC7	0.0	A0A0R0HKC7_SOYBN; Uncharacterized protein
TrEMBL	A0A445HGN1	0.0	A0A445HGN1_GLYSO; Transcription factor VOZ1 isoform A
STRING	XP_007148099.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]