PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN47985.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 168aa    MW: 19042.3 Da    PI: 4.985
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN47985.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.72.8e-143290563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++ +r+ +NRe+ArrsR RK++ +e L    ++L++eN+++  ++   ++++ ++++e+
  KHN47985.1 32 RKRKRMLSNRESARRSRMRKQQHLEGLSAQLDQLKKENTQMNTNIGISTQLYLNVEAEN 90
                7889****************************************999999988887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.3E-172892IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.4043076IPR004827Basic-leucine zipper domain
PfamPF001701.9E-103178IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-103275No hitNo description
SuperFamilySSF579599.85E-123284No hitNo description
CDDcd147022.40E-173383No hitNo description
PROSITE patternPS0003603550IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000165Biological ProcessMAPK cascade
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005622Cellular Componentintracellular
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004707Molecular FunctionMAP kinase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MASPGGSGTY SSGSSSLQNS GSEGDRDIME QRKRKRMLSN RESARRSRMR KQQHLEGLSA  60
QLDQLKKENT QMNTNIGIST QLYLNVEAEN AILRAQMEEL SKRLNSLNEM ISLINSTTTT  120
NNCLMFDEAQ ETTTQLFNDC GFMDAWNYGI PLNQQIMAYA DNDMLMMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14451RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN47985.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311370.0KT031137.1 Glycine max clone HN_CCL_138 BZIP transcription factor (Glyma08g12170.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237147.11e-121bZIP transcription factor bZIP110
RefseqXP_028243564.11e-121bZIP transcription factor 11-like
SwissprotC0Z2L53e-37BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A0R0IKI91e-120A0A0R0IKI9_SOYBN; Uncharacterized protein
TrEMBLA0A445JD951e-120A0A445JD95_GLYSO; BZIP transcription factor 44
TrEMBLQ0GPG31e-120Q0GPG3_SOYBN; BZIP transcription factor bZIP110
STRINGGLYMA08G12170.11e-121(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.18e-36G-box binding factor 6
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]