PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN47226.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 355aa    MW: 39922 Da    PI: 6.3559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN47226.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.85.8e-06227249325
                 HHHHHHHHHHHHHHHHHHHHHHC CS
         HLH   3 rahnerErrRRdriNsafeeLre 25 
                 ++h e+Er+RR+++N++f +Lr+
  KHN47226.1 227 MNHVEAERQRREKLNQRFYTLRS 249
                 5899*****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142153.0E-2927172IPR025610Transcription factor MYC/MYB N-terminal
SuperFamilySSF474595.38E-6222254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.65E-4222249No hitNo description
Gene3DG3DSA:4.10.280.106.2E-6228273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MKSEKMKGQS REFLESGSSS VVSNAVQQRL QFILQSRPEW WVYAIFWQAT KDSDSRLKLE  60
YGDGYFRGKE EKEEEQTRNV NDIEWFYRMS QTRSYVAGDG VVGCAYSSGV DVWLSGVNEF  120
ELNDCDDRVR EARSHGIHTL VCVYVPGGIL ELGSCHVFTL GYGLLEMAKS VFEESQNQNP  180
LNNPMGMNDA TAAKVDGSST DSSDADADAT FPMTRRGGGR AREALPMNHV EAERQRREKL  240
NQRFYTLRSA AKINHLESSA NRPKQAQVIH SSTSASSNMR VEVKILGAEA MIMVQSLNLN  300
HPPARLMDAL RDLNLQILHA TMSNIKEMML QDVVVKVPHD LMTQDALQNA ILHRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN47226.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003520013.20.0transcription factor MYC2-like
TrEMBLA0A0B2SKM50.0A0A0B2SKM5_GLYSO; Transcription factor bHLH14-like protein
STRINGGLYMA02G09670.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84134116
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.13e-40bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]