PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KHN47210.1

Organism

Glycine soja

Taxonomic ID

3848

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

VOZ

Protein Properties

Length: 478aa MW: 53316.8 Da PI: 6.001

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN47210.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	445	9.1e-137	201	417	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkd+llfaalsak+qgk+vgipecegaatakspwna+elfdls KHN47210.1 201 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLS 299 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei+++da+alyrlelklvd+kk++k+ KHN47210.1 300 VLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKT 398 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k ++ds+adlqk++grl+a KHN47210.1 399 KAANDSVADLQKQMGRLSA 417 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence Send to blast
MKKVPKNSCK SASHRLFKDK AKNRVDDLQL MFLDLQFARK ESRTVDAAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA SSQLAAPKPE PNDQTLQVGG 120 KVMFQEGQQQ HDFPFVDECK HFTSSVQNVA ANNPDGHDLE YHQFDLHQDY DHGLYTGFNG 180 TGYCEEDAIP HISSYLPSIC PPPSAFLGPK CALWDCPRPA QGLDWCQDYC SSFHAALALN 240 EGPPGMAPVL RPGGIGLKDN LLFAALSAKA QGKDVGIPEC EGAATAKSPW NAPELFDLSV 300 LEGETIREWL FFDKPRRAFE SGNRKQRSLP DYSGRGWHES RKQVMNEFGG LKRSYYMDPQ 360 PLNHFEWHLY EYEISKCDAC ALYRLELKLV DGKKNSKTKA ANDSVADLQK QMGRLSAEFP 420 HDNKRAAKGR AKINTKVGIG GGVYSASHRV TPLNGTYEYG LAAPYDYLVD NMGDYYGT

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence Send to blast

MKKVPKNSCK SASHRLFKDK AKNRVDDLQL MFLDLQFARK ESRTVDAAVL EEQVHQMLRE  60
WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA SSQLAAPKPE PNDQTLQVGG  120
KVMFQEGQQQ HDFPFVDECK HFTSSVQNVA ANNPDGHDLE YHQFDLHQDY DHGLYTGFNG  180
TGYCEEDAIP HISSYLPSIC PPPSAFLGPK CALWDCPRPA QGLDWCQDYC SSFHAALALN  240
EGPPGMAPVL RPGGIGLKDN LLFAALSAKA QGKDVGIPEC EGAATAKSPW NAPELFDLSV  300
LEGETIREWL FFDKPRRAFE SGNRKQRSLP DYSGRGWHES RKQVMNEFGG LKRSYYMDPQ  360
PLNHFEWHLY EYEISKCDAC ALYRLELKLV DGKKNSKTKA ANDSVADLQK QMGRLSAEFP  420
HDNKRAAKGR AKINTKVGIG GGVYSASHRV TPLNGTYEYG LAAPYDYLVD NMGDYYGT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN47210.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC166092	0.0	AC166092.4 Glycine max cultivar Williams 82 clone gmw1-93l19, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006594297.1	0.0	transcription factor VOZ1
Refseq	XP_028188939.1	0.0	transcription factor VOZ1-like isoform X2
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A445I667	0.0	A0A445I667_GLYSO; Transcription factor VOZ1 isoform A
TrEMBL	I1M050	0.0	I1M050_SOYBN; Uncharacterized protein
STRING	GLYMA13G24170.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]