PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN46510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 247aa MW: 27942.2 Da PI: 8.6703 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.2 | 1.1e-11 | 59 | 106 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er RR++i + f L l+P + kK++K++ L +A++Y+k+L+ KHN46510.1 59 QDHIIAERMRREKISQQFIALSALIPDL-----KKMDKVSLLGEAIRYVKQLK 106 5699************************.....9*****************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.418 | 56 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.27E-16 | 59 | 122 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.2E-9 | 60 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.3E-15 | 60 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.58E-10 | 61 | 110 | No hit | No description |
SMART | SM00353 | 1.4E-12 | 62 | 111 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0032440 | Molecular Function | 2-alkenal reductase [NAD(P)] activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
SYILSFDNMN PPTIKVESAS KPGTKVVNLE KALPSKNEPT RPQENKKMGS FARSSHHTQD 60 HIIAERMRRE KISQQFIALS ALIPDLKKMD KVSLLGEAIR YVKQLKEQVK LLEEQSKRKN 120 EESVMFAKKS QVFLADEDVS DTSSNSCEFG NSDDPSSKAN FLSLPEVEAR VSKKNVLIRI 180 LCEKEKTVLV NIFREIEKLH LSIIYSSALS FGSSVLDTTI VAEMEDEFNM GVKELARNLR 240 VGLMQFM |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN46510.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003524708.1 | 1e-179 | transcription factor bHLH18 | ||||
Refseq | XP_028232248.1 | 1e-179 | transcription factor bHLH18-like | ||||
TrEMBL | A0A0B2SNJ1 | 1e-179 | A0A0B2SNJ1_GLYSO; Transcription factor bHLH25 (Fragment) | ||||
STRING | GLYMA05G23330.2 | 1e-178 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF455 | 34 | 164 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 1e-56 | bHLH family protein |
Publications ? help Back to Top | |||
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