PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN45735.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 500aa    MW: 54715.7 Da    PI: 7.1616
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN45735.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000133944261754
                 HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++   L++l+ +      +K + a++L +A+eYIk L
  KHN45735.1 394 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 426
                 55666677777776.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.985377426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-11387444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-8387437IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.79E-5387430No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MAEEFQARIC GENWWSSTTI DSTRSSVLFP LSSSSSSISS SPCSVAANNN DAGNYSTRGT  60
SDTDLKATKC CAEDTNGNNL VSDTTYLGFV DVQKPHNKSE SAASGSGGML IDSTLQMMGF  120
GLTSSTSSSE NWNQPLLFRC NGRPESNFHS LIQEETGMDS SNSQIHRDWI PKSFSSGGGN  180
QQIDYNNFKP LLLSKQEFSL DHHSLSSLTT TGLSSNRGFP IGSASSYGNP STLQSLYDPN  240
YNPHPQHNSL FTNRPMFYSS KACYGTPCTE LPQPWSKVST FLKPTTTTNA KQQHPNIGLH  300
FSNNTPFWNA SAEALHDIRV GTFASSQSQY HRPTFDGEKP NCPSTLLNKF NSEKTLVSAS  360
MMTKKNVCEP ALKRPRIETS SPLPTFKVRK EKLGDRVTAL QQLVSPFGKT DTASVLHEAI  420
EYIKFLHDQV NVLSTSYMKN GAPIQHQQGC DDLKDSEGPQ QDLKSKGLCL VPISSTFPVA  480
TEATSAELWT PTFRSGALLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN45735.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028246917.10.0transcription factor bHLH112-like
TrEMBLA0A0B2SL910.0A0A0B2SL91_GLYSO; Transcription factor bHLH123
STRINGGLYMA08G06575.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-54bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]