PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN44520.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 113aa    MW: 13096.5 Da    PI: 4.0058
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN44520.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.000554243454
                TTS-STCHHHHHHHHHHHHHH CS
         HLH 34 pskKlsKaeiLekAveYIksL 54
                ++ K++ +++Le+A++Y+k L
  KHN44520.1  4 GGSKMDTVSMLEEAIQYVKFL 24
                5789***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.921124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-4131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.63E-6134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.53E-5228No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
MVPGGSKMDT VSMLEEAIQY VKFLKTQIWL HQTMINFMDN DNNNNNNYES SSSLPSPLLH  60
PNRDNCYYFP SEQFFSPQPN AVFDYDNMQD LAQCSFQGED TTYIDASLKY WPA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN44520.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006574196.11e-81transcription factor bHLH140
RefseqXP_028193495.11e-81transcription factor bHLH140-like
TrEMBLA0A445M2962e-80A0A445M296_GLYSO; Transcription factor bHLH140
TrEMBLK7K3F32e-80K7K3F3_SOYBN; Uncharacterized protein
STRINGGLYMA01G30660.24e-81(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71672846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.12e-16APRATAXIN-like