PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN44450.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family CAMTA
Protein Properties Length: 944aa    MW: 105650 Da    PI: 5.2524
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN44450.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11681.4e-52131283117
        CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                 +e k+rwlk+ e + iL n+++ ++t++++++p  gsl+L+nr+++r frkDG++w+kkkdgktv E+he+LKvg+ve+l+cyYah+een+tfqrr+yw
  KHN44450.1  13 QEaKRRWLKPVEALYILRNHDQCKFTHQPPHQPAGGSLFLFNRRIMRSFRKDGHNWRKKKDGKTVGEAHERLKVGNVEILNCYYAHGEENRTFQRRSYW 111
                 56699********************************************************************************************** PP

        CG-1 101 lLeeelekivlvhylev 117
                 +Le e+++ivlvhy+e+
  KHN44450.1 112 MLEPEYDHIVLVHYRET 128
                 ***************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143775.2548134IPR005559CG-1 DNA-binding domain
SMARTSM010764.7E-6611129IPR005559CG-1 DNA-binding domain
PfamPF038591.8E-4614127IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.108.7E-6384471IPR013783Immunoglobulin-like fold
PfamPF018333.2E-6385456IPR002909IPT domain
SuperFamilySSF812966.38E-16385469IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.205.1E-15578673IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.743579671IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.71E-15582673IPR020683Ankyrin repeat-containing domain
PfamPF127967.0E-8596673IPR020683Ankyrin repeat-containing domain
CDDcd002049.07E-13599671No hitNo description
SMARTSM002480.0038612641IPR002110Ankyrin repeat
PROSITE profilePS5008811.06612644IPR002110Ankyrin repeat
SMARTSM002483000651680IPR002110Ankyrin repeat
PROSITE profilePS500967.638730757IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 944 aa     Download sequence    Send to blast
MAGLEYSIDD LFQEAKRRWL KPVEALYILR NHDQCKFTHQ PPHQPAGGSL FLFNRRIMRS  60
FRKDGHNWRK KKDGKTVGEA HERLKVGNVE ILNCYYAHGE ENRTFQRRSY WMLEPEYDHI  120
VLVHYRETSE GKSNSEHVTQ LPSGSSPAFS QSHSSYTAHN PGTASMIGDS CEPNQNFSFP  180
GSLEVTFEAQ ALRQLEEQLS LNDDGFNEIA LDLVSGQDQR VVYKQDKSAA LSGPNDLGQP  240
CDGYNGRQDD SGTYYHDFLD DCPGGNEKTI YWTKVLESCK PLSVTKLPDQ HAYEAIGNEN  300
TLFSSGRGVI ANLENNQWLN SNSNNIENSV LLFPQDGGVK FPPYSLAETP GANSDYYETF  360
FDQFQNQGPL GVDSSLTVVQ KQKFTIRAVS PEYCYSTETT KVIIIGSFLC HDSDSTWACM  420
FGDVEVPAEI IQDGIICCEA PSNHLGKVNL CITSGNRVPC SEMREFEFRN KTTSCTRCNS  480
LETEGSKSPE DLLLLVRFAE MLLSSSTTKD DRIESGSHLS TEQKDDDDSW SHIIDTLLDS  540
TRTPSDAVKW LLEELLKDKL QLWLSNRRDE GTGCSLSKKE QGIIHMVSGL GFEWALNPIL  600
SCGVNINFRD INGWTALHWA ARFGREKMVA SLIASGASAG AVTDPSSQDP TGKTAASIAA  660
SHDHKGLAGY LSEVDLTSHL SSLTLEESEL SRESSELEAE LTVSSVSEEN LVASEDQVSL  720
KASLDAVRNA AQAAARIQAA FRAHSFRKRK ERDAAATVLD GYCIDAGSID NNISVLSAMS  780
KLSSQSWRDY KAALSIQKKY RNWKGRIEFL ALRQKIVKIQ LILWAVGILD KVVLRWRRKR  840
IGIQSVRQEM ESNEEESDDA DFLNVFRKEK LNAAIEKALK RVLSMVHSTG ARQQYRRLLS  900
LYRQAKIEHG STSDEAPLST SEENASNMED DDLCQFLDTF FWPS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN44450.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003537532.10.0calmodulin-binding transcription activator 4 isoform X1
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLK7LRY70.0K7LRY7_SOYBN; Uncharacterized protein
STRINGGLYMA11G36930.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45482950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  3. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]