PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN43407.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 345aa    MW: 37128.1 Da    PI: 6.5059
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN43407.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.87e-21198239242
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-S CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversa 42 
                 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k++ r  
  KHN43407.1 198 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQLHRVP 239
                 7************************************99965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-21182238IPR003657WRKY domain
SuperFamilySSF1182901.7E-18190240IPR003657WRKY domain
PROSITE profilePS5081120.38192237IPR003657WRKY domain
SMARTSM007742.9E-17197249IPR003657WRKY domain
PfamPF031061.4E-17199238IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MDFFSTSSAP DHKNNTSSSD TNDDYQKRDD QHDTHDRHGS ITADGSPTRA TDHHTGLNLT  60
CASAGMKKAD NSENPETENV ETKIVDPGAS TKLDVVNNAS VSDEKTDQDV SVYRSNNAEV  120
MSKTHDRDDD PQLTKLNLGK QACPDAAEDV LDRSSSQSWG SSKLEEQPKT AEQLPAEQIP  180
LRKARVSVRA RSEAPMISDG CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQLHRVPA  240
GHGATFPLPL HAAAAGPHLL GHPLFFQQKL PPAALMPLLQ RQPSSSMVET VSAAIASDPN  300
FTAALMAAIS SIIGVPRSSD DNNNGNGAIP GSPQLPQSCT TFSTN
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN43407.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150373e-80AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025982775.11e-154probable WRKY transcription factor 47 isoform X2
TrEMBLA0A445FK341e-153A0A445FK34_GLYSO; WRKY transcription factor 42
STRINGGLYMA19G40950.21e-152(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.12e-35WRKY family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]